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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs62071673 chr17:15597497 G/A ZNF286B chr17:18561742-18585575:- 0.42 8.59 1.2E-16 Box Plot
THCA rs62071716 chr17:15606637 T/C ZNF286B chr17:18561742-18585575:- 0.42 8.55 1.7E-16 Box Plot
THCA rs621456 chr11:77553030 C/T INTS4L1 chr7:64601603-64694600:+ 0.63 10.33 1.05E-22 Box Plot
THCA rs62148400 chr2:101072543 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs62148434 chr2:101080011 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs62148435 chr2:101080070 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs62148438 chr2:101088437 T/C LOC285359 chr3:101431278-101432259:+ 0.35 6.9 1.62E-11 Box Plot
THCA rs62148459 chr2:101126654 C/T LOC285359 chr3:101431278-101432259:+ 0.34 6.61 1.05E-10 Box Plot
THCA rs62150160 chr2:101127693 A/G LOC285359 chr3:101431278-101432259:+ 0.35 6.73 4.91E-11 Box Plot
THCA rs62155208 chr2:101156566 A/G LOC285359 chr3:101431278-101432259:+ 0.38 7.21 2.15E-12 Box Plot
THCA rs62155209 chr2:101165738 G/T LOC285359 chr3:101431278-101432259:+ 0.39 7.43 5.01E-13 Box Plot
THCA rs62155213 chr2:101184465 T/G LOC285359 chr3:101431278-101432259:+ 0.56 13.7 2.83E-36 Box Plot
THCA rs62157536 chr2:113277497 C/T RGPD5 chr2:110550335-110615272:+ -0.36 -6.2 1.21E-9 Box Plot
THCA rs62157542 chr2:113281346 A/C RGPD5 chr2:110550335-110615272:+ 0.47 6.77 3.75E-11 Box Plot
THCA rs62158271 chr2:98618567 G/A DNAJC17 chr15:41057353-41099676:- -0.27 -5.98 4.34E-9 Box Plot